TAP SWI/SNF_SWI3 in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5

The colour code corresponds to the rules for the domains:

should be contained

should not be contained

(Domain names are clickable)

List of proteins (8)

hide all | show all

name	name addition	Click button to show/hide sequence:	Download sequence?
c0_seq1_5	[235 - 4563] len=6334 path=[15414:0-279 5930:280-303 5954:304-718 6369:719-3699 9350:3700-4250 9901:4251-4537 26896:4538-4538 10188:4539-4776 24704:4777-4883 10426:4884-5951 11494:5952-6333]
c0_seq2_5	[235 - 4563] len=6227 path=[15414:0-279 5930:280-303 5954:304-718 6369:719-3699 9350:3700-4250 9901:4251-4537 26896:4538-4538 10188:4539-4776 10426:4777-5844 11494:5845-6226]
c0_seq3_2	[109 - 4050] len=5821 path=[25545:0-205 6369:206-3186 9350:3187-3737 9901:3738-4024 26896:4025-4025 10188:4026-4263 24704:4264-4370 10426:4371-5438 11494:5439-5820]
c0_seq4_2	[109 - 4050] len=5714 path=[25545:0-205 6369:206-3186 9350:3187-3737 9901:3738-4024 26896:4025-4025 10188:4026-4263 10426:4264-5331 11494:5332-5713]
c0_seq1_17_rc	comp13138_c0_seq1_17 [2855 - 210] (REVERSE SENSE) len=3002 path=[2980:0-3001]
c0_seq7_3	[819 - 2345] len=2418 path=[1:0-324 326:325-687 7955:688-1078 689:1079-1129 740:1130-1132 743:1133-2330 8869:2331-2417]
c0_seq8_2	[2 - 1954] len=2027 path=[1:0-324 326:325-687 689:688-738 740:739-741 743:742-1939 8869:1940-2026]
c0_seq9_2	[2 - 1903] len=1976 path=[1:0-324 326:325-687 740:688-690 743:691-1888 8869:1889-1975]

select all | unselect

A list of species letter codes included in the protein names can be found here (opens in new tab).

↑ back to top